STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000055962annotation not available (170 aa)    
Predicted Functional Partners:
ENSCHAP00000024562
Unc-5 netrin receptor C.
   
 
 0.430
ENSCHAP00000036623
Unc-5 netrin receptor A.
   
 
 0.430
ENSCHAP00000041711
Unc-5 netrin receptor Db.
   
 
 0.430
ENSCHAP00000061200
Unc-5 netrin receptor C.
   
 
 0.430
ENSCHAP00000027178
Slit homolog 2 (Drosophila).
    
 
 0.427
slit1
Slit guidance ligand 1.
    
 
 0.427
ENSCHAP00000038964
Slit homolog 3 (Drosophila).
    
 
 0.427
nyx
Nyctalopin.
    
 
 0.427
pofut2
Protein O-fucosyltransferase 2.
      
 0.422
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.