STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000056246Wingless-type MMTV integration site family, member 10a. (386 aa)    
Predicted Functional Partners:
ENSCHAP00000029861
Porcupine O-acyltransferase.
    
 0.923
LOC105898967
Protein-serine O-palmitoleoyltransferase porcupine-like.
    
 0.922
ENSCHAP00000033756
Frizzled class receptor 1.
    
 0.919
ENSCHAP00000050374
Frizzled class receptor 4.
    
 0.918
LOC105906249
Frizzled-8-like.
    
 0.916
ENSCHAP00000040273
Secreted frizzled-related protein 2.
    
 0.914
ENSCHAP00000046293
Frizzled class receptor 6.
    
 0.912
ENSCHAP00000023170
Frizzled class receptor 3b.
    
 0.908
fzd10
Frizzled class receptor 10.
    
 0.907
sfrp5
Secreted frizzled related protein 5.
    
 0.907
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.