STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
erp27Endoplasmic reticulum protein 27. (260 aa)    
Predicted Functional Partners:
suox
Sulfite oxidase.
   
 0.917
ENSCHAP00000060131
Cyclin G associated kinase.
   
 0.848
ENSCHAP00000033279
Cytochrome b5 reductase 4.
  
 0.813
hyou1
Hypoxia up-regulated 1.
  
 0.791
prdx5
Peroxiredoxin 5.
   
 0.746
ENSCHAP00000039938
Endoplasmic reticulum oxidoreductase beta.
   
 0.740
ENSCHAP00000054937
Endoplasmic reticulum oxidoreductase alpha.
   
 0.740
ENSCHAP00000037373
Heat shock protein 90, beta (grp94), member 1.
  
 0.739
ENSCHAP00000011930
Heat shock protein 5.
  
 0.729
ENSCHAP00000012252
annotation not available
  
 0.729
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (22%) [HD]