STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000056342annotation not available (72 aa)    
Predicted Functional Partners:
pde6a
Phosphodiesterase 6A.
   
 
 0.757
pde6b
Phosphodiesterase 6B.
   
 
 0.757
ENSCHAP00000040268
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1.
   
 
 0.746
ENSCHAP00000044904
Guanine nucleotide binding protein (G protein), beta polypeptide 1b.
   
 
 0.735
LOC105901427
Retinal guanylyl cyclase 2-like.
   
 
 0.724
LOC105894971
Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma-like.
  
  
 
0.702
ENSCHAP00000059466
Guanylyl cyclase 2.
   
 
 0.689
guk1
Guanylate kinase 1.
   
 
  0.685
GNAT2
Guanine nucleotide-binding protein G(t) subunit alpha-3-like.
   
 
 0.669
LOC105897302
Guanine nucleotide-binding protein G(t) subunit alpha-1-like.
   
 
 0.669
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]