STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000056639acyl-CoA thioesterase 11b. (646 aa)    
Predicted Functional Partners:
cryl1
Crystallin lambda 1.
  
 
 0.815
ENSCHAP00000016319
succinate-CoA ligase, ADP-forming, beta subunit.
    
 0.800
suclg2
succinate-CoA ligase GDP-forming beta subunit.
  
 
 0.796
aldh16a1
Aldehyde dehydrogenase 16 family member A1.
  
 0.778
aldh7a1
Aldehyde dehydrogenase 7 family member A1.
    
 0.774
ENSCHAP00000007525
CWC25 spliceosome associated protein homolog.
   
    0.772
LOC105909040
Chromosome unknown open reading frame, human C1orf109.
   
    0.772
ENSCHAP00000021837
Electron transfer flavoprotein subunit alpha.
    
 0.771
suclg1
succinate-CoA ligase alpha subunit.
    
  0.768
mlycd
malonyl-CoA decarboxylase.
    
 0.764
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.