STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
QPRTQuinolinate phosphoribosyltransferase. (299 aa)    
Predicted Functional Partners:
ENSCHAP00000016121
Nicotinate phosphoribosyltransferase.
   
 0.966
ENSCHAP00000057819
NAD synthetase 1.
    
 0.946
ENSCHAP00000016475
Nudix (nucleoside diphosphate linked moiety X)-type motif 15.
    
 0.926
nmnat2
Nicotinamide nucleotide adenylyltransferase 2.
    
 0.921
rbp1
Retinol binding protein 1.
    
 0.908
ENSCHAP00000028508
Nicotinamide nucleotide adenylyltransferase 1.
    
 0.908
nmrk2
Nicotinamide riboside kinase 2.
     
 0.903
LOC105907080
Nicotinamide riboside kinase 2-like.
     
 0.903
malsu1
Mitochondrial assembly of ribosomal large subunit 1.
    
 0.898
ENSCHAP00000006103
Aspartate dehydrogenase domain containing.
  
 
  0.886
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.