STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000057215TSC complex subunit 1b. (1419 aa)    
Predicted Functional Partners:
stip1
Stress induced phosphoprotein 1.
  
 0.988
ENSCHAP00000018051
TSC complex subunit 2.
   
 0.985
ENSCHAP00000053849
TBC1 domain family, member 7.
    
 0.984
ENSCHAP00000020723
Protein phosphatase 5, catalytic subunit.
    
 0.966
LOC105901881
GTP-binding protein Rheb-like.
   
 0.957
ENSCHAP00000036066
Mechanistic target of rapamycin kinase.
   
 0.943
sugt1
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.943
LOC105906841
Prostaglandin E synthase 3-like.
   
 0.939
LOC105897344
Prostaglandin E synthase 3-like.
   
 0.939
tcp1
T-complex 1.
  
 0.933
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.