STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000057404ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5. (444 aa)    
Predicted Functional Partners:
st6galnac6
ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6.
   
 
 0.892
ENSCHAP00000029290
annotation not available
     
0.876
ENSCHAP00000029330
annotation not available
     
 0.871
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2.
     
0.860
ST3GAL1
ST3 beta-galactoside alpha-2,3-sialyltransferase 1.
     
0.860
ENSCHAP00000031632
ST3 beta-galactoside alpha-2,3-sialyltransferase 8.
     
0.860
ENSCHAP00000003796
beta-1,4-N-acetyl-galactosaminyl transferase 1a.
     
 0.855
LOC105895177
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like.
   
 
 0.752
ENSCHAP00000040387
annotation not available
     
 0.709
ENSCHAP00000044987
annotation not available
     
 0.709
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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