STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrapNebulin related anchoring protein. (1933 aa)    
Predicted Functional Partners:
csrp3
Cysteine and glycine rich protein 3.
   
 
 0.784
LOC105904564
Myozenin-2-like.
   
  
 0.777
LMOD3
Leiomodin 3.
   
 0.747
ENSCHAP00000014350
annotation not available
 
     
0.745
myl1
Myosin light chain 1.
   
 
  0.677
ENSCHAP00000002250
Myozenin 1a.
   
  
 0.659
ENSCHAP00000050978
Myotilin.
   
  
 0.645
ENSCHAP00000032253
Actinin alpha 3b.
   
 0.644
ENSCHAP00000061022
Actinin alpha 3a.
   
 0.644
LOC105888795
Alpha-actinin-2.
   
 0.596
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.