STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
casp7Caspase 7. (319 aa)    
Predicted Functional Partners:
ENSCHAP00000048322
X-linked inhibitor of apoptosis.
   
 0.971
birc2
Baculoviral IAP repeat containing 2.
   
 0.951
ENSCHAP00000017150
Poly (ADP-ribose) polymerase 1.
   
 0.945
ENSCHAP00000001146
Caspase 9, apoptosis-related cysteine peptidase.
    
0.941
ENSCHAP00000037787
Centromere protein N.
   
 0.934
ENSCHAP00000054780
Caspase 10, apoptosis-related cysteine peptidase.
   
0.924
LOC105897314
Baculoviral IAP repeat-containing protein 5.1-like.
   
 0.917
ENSCHAP00000018034
Centromere protein I.
   
 0.917
ENSCHAP00000046742
annotation not available
   
 0.916
ENSCHAP00000018573
Poly (ADP-ribose) polymerase family, member 3.
    
 0.914
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.