STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000057909annotation not available (352 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.864
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.764
ENSCHAP00000009160
RAN binding protein 2.
    
 0.680
ppil6
Peptidylprolyl isomerase like 6.
    
  0.625
ENSCHAP00000004284
Retinoblastoma binding protein 5.
    
 0.624
ENSCHAP00000034369
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.618
ENSCHAP00000007184
Lysine (K)-specific demethylase 6B, b.
    
 0.603
ENSCHAP00000032575
Lysine (K)-specific demethylase 6B, a.
    
 0.603
ENSCHAP00000047368
Lysine (K)-specific demethylase 6A.
    
 0.603
RIMS2
Regulating synaptic membrane exocytosis 2.
    
  0.599
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.