STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058152annotation not available (669 aa)    
Predicted Functional Partners:
ENSCHAP00000034369
Ash2 like, histone lysine methyltransferase complex subunit.
   
 0.978
ENSCHAP00000004284
Retinoblastoma binding protein 5.
    
 0.976
ENSCHAP00000030788
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.976
ENSCHAP00000048221
WD repeat domain 82.
    
 0.975
ENSCHAP00000027219
SET domain containing 1A, histone lysine methyltransferase.
   
 0.939
ENSCHAP00000042546
SET domain containing 1B, histone lysine methyltransferase a.
   
 0.939
ENSCHAP00000058154
annotation not available
 
      0.900
smarcb1
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1.
    
 0.809
rps27a
Ribosomal protein S27a.
    
 
 0.754
ENSCHAP00000013787
PHD finger protein 3.
   
 
0.746
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.