STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058276Arachidonate 12-lipoxygenase. (669 aa)    
Predicted Functional Partners:
LOC105903293
Docosahexaenoic acid omega-hydroxylase CYP4F3-like.
   
 0.879
ENSCHAP00000033249
Prostaglandin-endoperoxide synthase 2b.
   
 
 0.867
ENSCHAP00000057220
Prostaglandin-endoperoxide synthase 1.
   
 
 0.867
pla2g4a
Phospholipase A2 group IVA.
   
 
 0.860
pla2g12a
Phospholipase A2 group XIIA.
    
  0.859
ENSCHAP00000011318
annotation not available
  
  
 
0.857
alox5
Arachidonate 5-lipoxygenase.
  
  
 
0.855
ENSCHAP00000014176
Phospholipase A2, group VI (cytosolic, calcium-independent).
   
 
 0.854
ENSCHAP00000027818
Zgc:92162.
     
 0.848
lta4h
Leukotriene A4 hydrolase.
     
 0.845
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.