STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058290acyl-CoA dehydrogenase family, member 9. (632 aa)    
Predicted Functional Partners:
ENSCHAP00000008049
enoyl-CoA delta isomerase 2.
  
 0.968
ENSCHAP00000017826
ECSIT signaling integrator.
   
 0.966
ndufaf1
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
 0.964
ENSCHAP00000021837
Electron transfer flavoprotein subunit alpha.
  
 0.947
etfb
Electron transfer flavoprotein subunit beta.
  
 0.940
LOC105895092
Non-specific lipid-transfer protein-like.
  
 0.938
ENSCHAP00000051341
Sterol carrier protein 2a.
  
 0.938
timmdc1
Translocase of inner mitochondrial membrane domain containing 1.
    
 0.934
ENSCHAP00000047091
NADH:ubiquinone oxidoreductase complex assembly factor.
    
 0.932
ndufs2
NADH:ubiquinone oxidoreductase core subunit S2.
   
 0.931
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.