ENSCHAP00000058344 protein (Clupea harengus)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

ENSCHAP00000058344

annotation not available (471 aa)

Predicted Functional Partners:

ENSCHAP00000027667

0.742

ENSCHAP00000051271

0.680

ENSCHAP00000047548

0.641

ENSCHAP00000007825

0.629

CUL1

0.620

LOC105907046

0.620

ENSCHAP00000008719

0.609

rbx1

0.597

ENSCHAP00000038095

0.589

ube2m

0.587

Your Current Organism:

Clupea harengus

NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUL1	ENSCHAP00000007825	ENSCHAP00000025688	ENSCHAP00000007825	Cullin 1.	NEDD8 ubiquitin like modifier, like.	0.988
CUL1	ENSCHAP00000008719	ENSCHAP00000025688	ENSCHAP00000008719	Cullin 1.	COMM domain containing 4.	0.715
CUL1	ENSCHAP00000027667	ENSCHAP00000025688	ENSCHAP00000027667	Cullin 1.	Cullin 3a.	0.792
CUL1	ENSCHAP00000047548	ENSCHAP00000025688	ENSCHAP00000047548	Cullin 1.	Nedd8 activating enzyme E1 subunit 1.	0.855
CUL1	ENSCHAP00000051271	ENSCHAP00000025688	ENSCHAP00000051271	Cullin 1.	COMM domain containing 5.	0.659
CUL1	ENSCHAP00000058344	ENSCHAP00000025688	ENSCHAP00000058344	Cullin 1.	annotation not available	0.620
CUL1	rbx1	ENSCHAP00000025688	ENSCHAP00000032886	Cullin 1.	Ring-box 1.	0.994
CUL1	ube2m	ENSCHAP00000025688	ENSCHAP00000020937	Cullin 1.	Ubiquitin conjugating enzyme E2 M.	0.952
ENSCHAP00000007825	CUL1	ENSCHAP00000007825	ENSCHAP00000025688	NEDD8 ubiquitin like modifier, like.	Cullin 1.	0.988
ENSCHAP00000007825	ENSCHAP00000008719	ENSCHAP00000007825	ENSCHAP00000008719	NEDD8 ubiquitin like modifier, like.	COMM domain containing 4.	0.828
ENSCHAP00000007825	ENSCHAP00000027667	ENSCHAP00000007825	ENSCHAP00000027667	NEDD8 ubiquitin like modifier, like.	Cullin 3a.	0.992
ENSCHAP00000007825	ENSCHAP00000038095	ENSCHAP00000007825	ENSCHAP00000038095	NEDD8 ubiquitin like modifier, like.	CDK2 associated cullin domain 1.	0.934
ENSCHAP00000007825	ENSCHAP00000047548	ENSCHAP00000007825	ENSCHAP00000047548	NEDD8 ubiquitin like modifier, like.	Nedd8 activating enzyme E1 subunit 1.	0.992
ENSCHAP00000007825	ENSCHAP00000051271	ENSCHAP00000007825	ENSCHAP00000051271	NEDD8 ubiquitin like modifier, like.	COMM domain containing 5.	0.832
ENSCHAP00000007825	ENSCHAP00000058344	ENSCHAP00000007825	ENSCHAP00000058344	NEDD8 ubiquitin like modifier, like.	annotation not available	0.629
ENSCHAP00000007825	LOC105907046	ENSCHAP00000007825	ENSCHAP00000029234	NEDD8 ubiquitin like modifier, like.	Cullin-1.	0.988
ENSCHAP00000007825	rbx1	ENSCHAP00000007825	ENSCHAP00000032886	NEDD8 ubiquitin like modifier, like.	Ring-box 1.	0.997
ENSCHAP00000007825	ube2m	ENSCHAP00000007825	ENSCHAP00000020937	NEDD8 ubiquitin like modifier, like.	Ubiquitin conjugating enzyme E2 M.	0.979
ENSCHAP00000008719	CUL1	ENSCHAP00000008719	ENSCHAP00000025688	COMM domain containing 4.	Cullin 1.	0.715
ENSCHAP00000008719	ENSCHAP00000007825	ENSCHAP00000008719	ENSCHAP00000007825	COMM domain containing 4.	NEDD8 ubiquitin like modifier, like.	0.828