STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058416Phospholipase C, delta 1b. (794 aa)    
Predicted Functional Partners:
ENSCHAP00000040296
Diacylglycerol kinase, zeta b.
   
 0.885
LOC105900626
Phosphatidylinositol 5-phosphate 4-kinase type-2 alpha-like.
   
 0.880
ENSCHAP00000060819
Phosphatidylinositol-5-phosphate 4-kinase, type II, gamma a.
   
 0.880
ENSCHAP00000021912
Phosphatidylinositol-5-phosphate 4-kinase, type II, alpha a.
   
 0.879
ENSCHAP00000021155
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma a.
   
 0.877
ENSCHAP00000022982
Phosphatidylinositol-4-phosphate 5-kinase-like 1.
    
 0.877
ENSCHAP00000025082
Phosphatidylinositol-4-phosphate 5-kinase, type I, beta a.
   
 0.877
LOC105901155
Phosphatidylinositol 4-phosphate 5-kinase type-1 beta-like.
   
 0.877
ENSCHAP00000047251
Phosphatidylinositol-4-phosphate 5-kinase, type I, gamma b.
   
 0.876
ENSCHAP00000037623
Synaptojanin 1.
   
 0.865
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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