STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058479Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta. (1585 aa)    
Predicted Functional Partners:
ENSCHAP00000060131
Cyclin G associated kinase.
    
 0.984
ENSCHAP00000047682
Myotubularin related protein 1a.
    
 0.884
ENSCHAP00000047243
Myotubularin 1.
    
 0.881
MTMR4
Myotubularin related protein 4.
    
 0.876
ENSCHAP00000039433
Inositol polyphosphate phosphatase-like 1b.
     
 0.860
pikfyve
Phosphoinositide kinase, FYVE-type zinc finger containing.
   
 
 0.851
ocrl
OCRL inositol polyphosphate-5-phosphatase.
     
 0.849
ENSCHAP00000003108
Inositol polyphosphate-5-phosphatase B.
     
 0.847
ENSCHAP00000006898
Inositol polyphosphate-4-phosphatase type II B.
     
 0.845
ENSCHAP00000031468
Inositol polyphosphate-4-phosphatase type I Ab.
     
 0.843
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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