STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058554annotation not available (978 aa)    
Predicted Functional Partners:
LOC105890846
ephrin-A5-like.
   
 0.828
ENSCHAP00000015972
ephrin-B2a.
   
 0.779
ENSCHAP00000009306
annotation not available
   
 0.767
efnb1
Ephrin B1.
   
 0.767
ENSCHAP00000016490
Intersectin 2b.
   
 0.752
ENSCHAP00000057857
Intersectin 2a.
   
 0.752
ENSCHAP00000007016
ephrin-B3a.
   
 0.750
efnb3
Ephrin B3.
   
 0.750
ENSCHAP00000046716
ephrin-A2a.
   
 0.734
ENSCHAP00000039552
annotation not available
   
 0.728
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.