STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058767ELL associated factor 2. (295 aa)    
Predicted Functional Partners:
ENSCHAP00000021867
AF4/FMR2 family, member 4.
    
 0.990
eaf1
ELL associated factor 1.
  
 
0.985
LOC105905602
RNA polymerase II elongation factor ELL-like.
    
 0.974
ENSCHAP00000060990
Elongation factor, RNA polymerase II, 2.
    
 0.974
ENSCHAP00000039774
Interactor of little elongator complex ELL subunit 2.
    
 0.973
supt5h
SPT5 homolog, DSIF elongation factor subunit.
    
 0.970
ENSCHAP00000062042
annotation not available
    
 0.966
ENSCHAP00000033963
annotation not available
    
 0.956
ENSCHAP00000013195
Cyclin-dependent kinase 9 (CDC2-related kinase).
   
 0.947
leo1
LEO1 homolog, Paf1/RNA polymerase II complex component.
   
 
  0.945
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.