STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000058813Microtubule associated serine/threonine kinase 1b. (1605 aa)    
Predicted Functional Partners:
ENSCHAP00000043988
Endosulfine alpha a.
    
 0.798
ENSCHAP00000010427
Endosulfine alpha b.
    
 0.774
LOC105900832
annotation not available
    
 
 0.626
ENSCHAP00000048241
Transmembrane phosphatase with tensin homology.
    
 
 0.610
chek2
Checkpoint kinase 2.
   
   
0.568
ccna1
Cyclin A1.
   
  
 0.536
ccna2
Cyclin A2.
   
  
 0.536
ENSCHAP00000060131
Cyclin G associated kinase.
   
 
0.475
ENSCHAP00000044277
Cell division cycle 6 homolog (S. cerevisiae).
   
    0.473
ENSCHAP00000046631
Cell division cycle 6 homolog (S. cerevisiae).
   
    0.473
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.