STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059039NHS-like 2. (1282 aa)    
Predicted Functional Partners:
cyfip1
Cytoplasmic FMR1 interacting protein 1.
    
   0.575
ENSCHAP00000049306
WASP family member 1.
    
   0.570
ENSCHAP00000060048
WASP family member 2.
    
   0.570
ENSCHAP00000003537
Abl-interactor 2a.
    
 
 0.560
nckap1
NCK associated protein 1.
    
   0.550
nckap1l
NCK associated protein 1 like.
    
   0.550
ENSCHAP00000015550
Abl-interactor 1b.
    
 
 0.521
ABI1
Abl interactor 1.
    
 
 0.521
polr2m
RNA polymerase II subunit M.
      
 0.519
ENSCHAP00000051624
Cytoplasmic FMR1 interacting protein 2.
    
   0.511
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.