STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059048BCL2 like 16. (203 aa)    
Predicted Functional Partners:
becn1
Beclin 1.
    
 0.869
ENSCHAP00000042234
annotation not available
    
 0.858
ENSCHAP00000010370
BCL2 associated agonist of cell death a.
   
 0.782
ENSCHAP00000035537
BCL2 associated agonist of cell death b.
   
 0.782
ENSCHAP00000011963
Apoptotic peptidase activating factor 1.
    
 0.731
pink1
PTEN induced kinase 1.
    
 0.702
ENSCHAP00000016427
Parkin RBR E3 ubiquitin protein ligase.
    
 0.691
ENSCHAP00000011211
annotation not available
    
 0.630
LOC105911849
Cytochrome c.
    
 0.630
ENSCHAP00000057031
annotation not available
    
 0.630
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.