STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059092annotation not available (429 aa)    
Predicted Functional Partners:
ENSCHAP00000049882
Kit ligand a.
    
 0.907
LOC105892101
Growth factor receptor-bound protein 2.
    
 0.901
ENSCHAP00000014803
annotation not available
    
 0.900
ENSCHAP00000024537
annotation not available
    
 0.900
ENSCHAP00000000147
Fibroblast growth factor 21.
    
 0.898
fgf5
Fibroblast growth factor 5.
    
 0.898
ENSCHAP00000003061
Fibroblast growth factor 18a.
    
 0.898
fgf4
Fibroblast growth factor 4.
    
 0.898
ENSCHAP00000003526
Fibroblast growth factor 3.
    
 0.898
LOC105893693
Fibroblast growth factor 18-like.
    
 0.898
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.