STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105900474Neuritin-like. (143 aa)    
Predicted Functional Partners:
vwc2
Von Willebrand factor C domain containing 2.
     
 0.849
LRRTM4
Leucine-rich repeat transmembrane neuronal protein 4-like.
   
 
  0.728
vwc2l
Von Willebrand factor C domain containing 2 like.
     
 0.728
gria2
Glutamate ionotropic receptor AMPA type subunit 2.
     
 0.622
ENSCHAP00000061965
Glutamate receptor, ionotropic, AMPA 2a.
     
 0.622
ENSCHAP00000017814
Chondroadherin-like b.
   
 
  0.561
ENSCHAP00000033017
annotation not available
   
 
  0.561
ENSCHAP00000004055
Calcium channel, voltage-dependent, gamma subunit 4a.
     
 0.501
CACNG2
Voltage-dependent calcium channel gamma-2 subunit.
     
 0.501
ENSCHAP00000007640
annotation not available
     
 0.501
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.