STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059278annotation not available (217 aa)    
Predicted Functional Partners:
ENSCHAP00000003156
annotation not available
    
  0.497
ENSCHAP00000008564
Zmp:0000000846.
    
  0.497
ENSCHAP00000012495
annotation not available
    
  0.497
ENSCHAP00000053830
Tenascin N.
    
  0.497
tnr
Tenascin R.
    
  0.497
HGFAC
HGF activator.
    
  0.415
ENSCHAP00000038619
annotation not available
    
  0.415
HABP2
Hyaluronan binding protein 2.
    
  0.415
ENSCHAP00000003051
annotation not available
    
  0.406
ENSCHAP00000003800
annotation not available
    
  0.406
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.