STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059514annotation not available (341 aa)    
Predicted Functional Partners:
rps14
Ribosomal protein S14.
   
 0.689
ENSCHAP00000047683
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.689
ENSCHAP00000012516
Cathepsin H.
  
 
0.682
ENSCHAP00000019636
Cathepsin F.
  
0.671
ENSCHAP00000017414
Cathepsin O.
  
0.655
ENSCHAP00000021749
annotation not available
  
0.639
ctsz
Cathepsin Z.
  
0.638
birc2
Baculoviral IAP repeat containing 2.
     
 0.619
ENSCHAP00000021622
Cathepsin C.
   
0.615
LOC105901987
Cathepsin K-like.
  
  
 
0.612
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.