STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABCC4Multidrug resistance-associated protein 4-like. (1347 aa)    
Predicted Functional Partners:
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
  
 0.720
gopc
Golgi associated PDZ and coiled-coil motif containing.
   
 0.666
ENSCHAP00000006582
annotation not available
   
 0.664
ENSCHAP00000009023
annotation not available
   
 0.664
SLC9A3R2
SLC9A3 regulator 2.
   
 0.664
usp10
Ubiquitin specific peptidase 10.
    
  0.660
KCNJ11
ATP-sensitive inward rectifier potassium channel 11-like.
   
 0.618
kcnj8
Potassium inwardly rectifying channel subfamily J member 8.
   
 0.618
kcnj11
Potassium inwardly rectifying channel subfamily J member 11.
   
 0.618
LOC105894957
Inward rectifier potassium channel 2-like.
    
 0.617
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.