STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000059897annotation not available (322 aa)    
Predicted Functional Partners:
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3.
     
 0.800
b4galt4
Beta-1,4-galactosyltransferase 4.
   
 
 0.784
ENSCHAP00000034799
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
   
 
 0.784
LOC105891829
Beta-1,4-galactosyltransferase 3-like.
   
 
 0.784
ENSCHAP00000048888
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
   
 
 0.784
LOC105902476
Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like.
     
 0.773
st3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4.
     
 0.772
b3gnt5
UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5.
   
 
 
0.766
A3GALT2
Alpha 1,3-galactosyltransferase 2.
     
 0.692
ENSCHAP00000029663
annotation not available
     
 0.692
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.