STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adss1Adenylosuccinate synthase 1. (471 aa)    
Predicted Functional Partners:
gart
annotation not available
  
 0.989
ENSCHAP00000054107
5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase.
  
 0.983
ENSCHAP00000005247
Guanosine monophosphate reductase.
  
 
 0.956
ENSCHAP00000057432
Guanosine monophosphate reductase 2.
  
 
 0.956
ENSCHAP00000035300
IMP (inosine 5'-monophosphate) dehydrogenase 2.
  
 
 0.955
ENSCHAP00000032091
IMP (inosine 5'-monophosphate) dehydrogenase 1a.
  
 
 0.947
ENSCHAP00000045585
IMP (inosine 5'-monophosphate) dehydrogenase 1b.
  
 
 0.947
ENSCHAP00000025842
annotation not available
  
 0.939
ppat
Phosphoribosyl pyrophosphate amidotransferase.
  
 
 0.938
ENSCHAP00000020549
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
  
 
 0.929
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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