STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105911104GDNF family receptor alpha-2-like. (489 aa)    
Predicted Functional Partners:
ENSCHAP00000012779
Ret proto-oncogene receptor tyrosine kinase.
    
 0.973
gdnf
Glial cell derived neurotrophic factor.
    
 0.951
ENSCHAP00000000467
Neurturin.
    
 0.945
NRTN
Neurturin.
    
 0.945
PSPN
Persephin.
     
 0.762
ENSCHAP00000011398
annotation not available
    
 0.716
ENSCHAP00000014857
Fibroblast growth factor receptor 2.
    
 0.716
ENSCHAP00000018213
STIL centriolar assembly protein.
    
 0.716
fgfrl1
Fibroblast growth factor receptor like 1.
    
 0.716
LOC105908136
Fibroblast growth factor receptor-like 1.
    
 0.716
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.