STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000060530Cysteine sulfinic acid decarboxylase. (514 aa)    
Predicted Functional Partners:
ENSCHAP00000051223
Alanine--glyoxylate aminotransferase 2.
 
 0.903
gad2
Glutamate decarboxylase 2.
  
0.900
aldh18a1
Aldehyde dehydrogenase 18 family member A1.
    
 0.897
ENSCHAP00000010007
Aldehyde dehydrogenase 18 family, member A1.
    
 0.897
LOC105900204
4-aminobutyrate aminotransferase, mitochondrial-like.
  
 0.894
abat
4-aminobutyrate aminotransferase.
  
 0.894
ENSCHAP00000020549
Carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase.
   
 0.892
ENSCHAP00000035217
Cysteine dioxygenase, type I.
     
 0.889
ENSCHAP00000026988
glutamyl-prolyl-tRNA synthetase 1.
    
 0.888
LOC105898664
Aldehyde dehydrogenase family 3 member B1-like.
   
 0.872
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.