STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000060844Zgc:162344. (569 aa)    
Predicted Functional Partners:
mipol1
Mirror-image polydactyly 1.
   
    0.987
rpap2
RNA polymerase II associated protein 2.
   
    0.987
frk
Fyn related Src family tyrosine kinase.
   
    0.852
ENSCHAP00000002289
WD repeat containing planar cell polarity effector.
   
    0.753
ENSCHAP00000057082
Astrotactin 1.
   
    0.615
CCDC14
Coiled-coil domain containing 14.
    
   0.586
LOC105896722
Chromosome unknown open reading frame, human C12orf45.
   
    0.546
ENSCHAP00000017862
ADAMTS-like 3.
   
    0.537
ADAMTSL1
ADAMTS like 1.
   
    0.537
ENSCHAP00000060848
Tubulin polyglutamylase complex subunit 2.
      
 0.533
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.