STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105902476Globoside alpha-1,3-N-acetylgalactosaminyltransferase 1-like. (327 aa)    
Predicted Functional Partners:
ENSCHAP00000045054
annotation not available
  
  
 
0.844
ENSCHAP00000035254
annotation not available
  
  
 
0.839
B3GALT1
Beta-1,3-galactosyltransferase 1.
     
 0.773
LOC105911962
Beta-1,3-galactosyltransferase 1-like.
     
 0.773
ENSCHAP00000059897
annotation not available
     
 0.773
ENSCHAP00000004644
annotation not available
     
 0.706
ENSCHAP00000025612
Sphingosine kinase 2.
     
 0.706
SPHK1
Sphingosine kinase 1.
     
 0.706
SPHK1-2
Sphingosine kinase 1.
     
 0.706
st3gal4
ST3 beta-galactoside alpha-2,3-sialyltransferase 4.
     
 0.614
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.