STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000061025BCL2 family apoptosis regulator BOK b. (200 aa)    
Predicted Functional Partners:
ENSCHAP00000042234
annotation not available
    
 0.880
becn1
Beclin 1.
    
 0.869
ENSCHAP00000010370
BCL2 associated agonist of cell death a.
   
 0.812
ENSCHAP00000035537
BCL2 associated agonist of cell death b.
   
 0.792
ENSCHAP00000011963
Apoptotic peptidase activating factor 1.
    
 0.731
ENSCHAP00000016427
Parkin RBR E3 ubiquitin protein ligase.
    
 0.711
pink1
PTEN induced kinase 1.
    
 0.702
LOC105911849
Cytochrome c.
    
 0.685
ENSCHAP00000057031
annotation not available
    
 0.685
LOC105902776
Dynamin-1-like protein.
    
 0.642
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.