STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnm1lDynamin 1 like. (739 aa)    
Predicted Functional Partners:
ENSCHAP00000060131
Cyclin G associated kinase.
   
 0.996
pgam5
PGAM family member 5, mitochondrial serine/threonine protein phosphatase.
    
 0.926
ENSCHAP00000004556
Mitochondrial elongation factor 2.
    
 
 0.918
ENSCHAP00000016490
Intersectin 2b.
    
 
 0.901
ENSCHAP00000057857
Intersectin 2a.
    
 
 0.901
ENSCHAP00000024060
annotation not available
   
 0.870
ENSCHAP00000015917
Receptor (TNFRSF)-interacting serine-threonine kinase 1, like.
   
 0.868
pink1
PTEN induced kinase 1.
    
 0.853
ENSCHAP00000016427
Parkin RBR E3 ubiquitin protein ligase.
    
 0.853
LOC105902776
Dynamin-1-like protein.
  
  
 
0.851
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.