STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000061291Lysine (K)-specific demethylase 4C. (1251 aa)    
Predicted Functional Partners:
ENSCHAP00000034369
Ash2 like, histone lysine methyltransferase complex subunit.
    
 0.769
ENSCHAP00000062455
Lysine (K)-specific demethylase 1a.
   
 0.768
ENSCHAP00000031370
Estrogen receptor 2a.
    
 0.689
ENSCHAP00000000591
Zinc finger protein 217.
    
  0.687
ENSCHAP00000030788
Dpy-30 histone methyltransferase complex regulatory subunit.
    
 0.686
ENSCHAP00000037425
Tumor protein p53 binding protein, 1.
     
 0.671
ENSCHAP00000035355
ATM serine/threonine kinase.
     
 0.670
ENSCHAP00000036254
Ring finger protein 168.
    
 0.668
ENSCHAP00000020098
Protein inhibitor of activated STAT, 4b.
   
 0.666
rnf8
Ring finger protein 8.
    
 0.664
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.