STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000061639Cathepsin La. (378 aa)    
Predicted Functional Partners:
ENSCHAP00000030175
BCL2 like 1.
     
 0.824
birc2
Baculoviral IAP repeat containing 2.
     
 0.820
ENSCHAP00000048322
X-linked inhibitor of apoptosis.
     
 0.818
LOC105897314
Baculoviral IAP repeat-containing protein 5.1-like.
     
 0.816
LOC105891347
Apoptosis regulator Bcl-2-like.
   
 
 0.811
ENSCHAP00000025348
annotation not available
     
 0.807
rps14
Ribosomal protein S14.
   
 0.689
ENSCHAP00000047683
CD74 molecule, major histocompatibility complex, class II invariant chain a.
   
 0.689
ENSCHAP00000012516
Cathepsin H.
  
 
0.683
LOC105908958
Baculoviral IAP repeat-containing protein 5.2-A-like.
     
 0.677
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.