STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000061654annotation not available (680 aa)    
Predicted Functional Partners:
ENSCHAP00000008683
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
 0.964
ENSCHAP00000052103
annotation not available
    
 0.961
KCNE2
Potassium voltage-gated channel subfamily E regulatory subunit 2.
    
 0.926
rps7
Ribosomal protein S7.
   
 0.891
LOC105899109
cAMP-dependent protein kinase catalytic subunit beta.
    
 0.870
rpl31
Ribosomal protein L31.
   
 0.868
rpl23a
Ribosomal protein L23a.
  
 0.865
ENSCHAP00000026219
A kinase (PRKA) anchor protein 9.
    
 0.863
rpl35
Ribosomal protein L35.
  
 0.861
rpl29
Ribosomal protein L29.
   
 0.860
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.