STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000062091Zgc:101569. (308 aa)    
Predicted Functional Partners:
ivd
isovaleryl-CoA dehydrogenase.
  
 0.963
acaa1
acetyl-CoA acyltransferase 1.
  
 0.961
acaa2
acetyl-CoA acyltransferase 2.
  
 0.961
hadhb
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.960
acadsb
acyl-CoA dehydrogenase short/branched chain.
  
 0.947
acads
acyl-CoA dehydrogenase short chain.
  
 0.947
ENSCHAP00000034591
acyl-CoA oxidase 1, palmitoyl.
  
 0.938
ENSCHAP00000039091
annotation not available
  
 0.938
gcdh
glutaryl-CoA dehydrogenase.
  
 0.934
LOC105903442
glutaryl-CoA dehydrogenase, mitochondrial-like.
  
 0.934
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.