STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpl9Ribosomal protein L9. (193 aa)    
Predicted Functional Partners:
ENSCHAP00000000372
Mitochondrial ribosomal protein L12.
  
 
 0.999
ENSCHAP00000000418
Ribosomal protein S21.
   
 0.999
rpl34
Ribosomal protein L34.
  
 0.999
ENSCHAP00000000935
Ribosomal protein S26.
   
 
 0.999
ENSCHAP00000001326
Mitochondrial ribosomal protein L22.
  
 0.999
rps24
Ribosomal protein S24.
   
 0.999
rpl27
Ribosomal protein L27.
  
 0.999
ENSCHAP00000003974
Receptor for activated C kinase 1.
   
 0.999
mrpl20
Mitochondrial ribosomal protein L20.
  
 
 0.999
ENSCHAP00000005646
Ribosomal protein L23.
  
 0.999
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.