STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000062312Contactin 2. (1041 aa)    
Predicted Functional Partners:
ENSCHAP00000025399
annotation not available
   
0.935
ENSCHAP00000049064
L1 cell adhesion molecule, paralog a.
   
0.935
LOC105907011
Contactin-associated protein-like 2.
   
 0.919
ENSCHAP00000036657
annotation not available
   
 0.919
ENSCHAP00000061888
Neuronal cell adhesion molecule a.
   
0.844
NRCAM
Neuronal cell adhesion molecule.
   
0.836
ENSCHAP00000051214
annotation not available
   
0.833
chl1
Cell adhesion molecule L1 like.
   
0.833
ENSCHAP00000062205
Neurofascin homolog (chicken) a.
   
0.833
ENSCHAP00000016346
Protein tyrosine phosphatase receptor type Ga.
    
 0.807
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.