STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KATNBL1Katanin regulatory subunit B1 like 1. (356 aa)    
Predicted Functional Partners:
katnb1
Katanin regulatory subunit B1.
    
 0.956
ENSCHAP00000028320
Katanin p60 subunit A-like 1.
   
 0.908
LOC105902230
Katanin p60 ATPase-containing subunit A1.
   
 0.908
ENSCHAP00000011314
Katanin p60 subunit A-like 2.
   
 0.889
ENSCHAP00000002175
annotation not available
    
 0.559
gk
Glycerol kinase.
    
 0.559
ENSCHAP00000005557
annotation not available
    
 0.559
ENSCHAP00000006132
annotation not available
    
 0.559
PSMC1
26S protease regulatory subunit 4.
    
 0.559
ENSCHAP00000013709
ATPase family AAA domain containing 2B.
    
 0.559
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.