STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC105908305Protein quaking-A. (393 aa)    
Predicted Functional Partners:
ENSCHAP00000000090
Mediator complex subunit 25.
   
   0.936
ENSCHAP00000022934
Mediator complex subunit 15.
   
   0.936
med27
Mediator complex subunit 27.
    
   0.935
ENSCHAP00000000973
Mediator complex subunit 4.
   
   0.935
med29
Mediator complex subunit 29.
    
   0.935
ENSCHAP00000022671
Mediator complex subunit 24.
   
   0.935
med23
Mediator complex subunit 23.
    
   0.935
ENSCHAP00000027704
annotation not available
    
   0.935
ENSCHAP00000048371
Mediator complex subunit 14.
    
   0.935
med10
Mediator complex subunit 10.
    
   0.935
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.