STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCHAP00000062530Cholinergic receptor, nicotinic, alpha 9. (568 aa)    
Predicted Functional Partners:
ENSCHAP00000017344
Cholinergic receptor, nicotinic, alpha 1 (muscle).
  
0.832
CHRNA1
Cholinergic receptor nicotinic alpha 1 subunit.
  
0.831
ENSCHAP00000030512
Si:ch211-39a7.1.
  
0.758
ENSCHAP00000051863
annotation not available
  
0.755
ENSCHAP00000060035
Si:ch73-380n15.2.
  
0.755
LOC105906770
Neuronal acetylcholine receptor subunit alpha-2-like.
  
 
 
0.639
ENSCHAP00000023968
Cholinergic receptor, nicotinic, alpha 2b (neuronal).
  
 
 
0.638
ENSCHAP00000029187
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
  
 
 
0.636
ENSCHAP00000015016
Cholinergic receptor, nicotinic, beta 3b (neuronal).
  
  
0.633
ENSCHAP00000009420
Cholinergic receptor, nicotinic, alpha 5.
  
  
0.631
Your Current Organism:
Clupea harengus
NCBI taxonomy Id: 7950
Other names: Atlantic herring, C. harengus, Clupea harengus harengus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.