Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22122.1PFAM: Mechanosensitive ion channel MscS; KEGG: hth:HTH_1400 mechanosensitive ion channel. (342 aa)    
Predicted Functional Partners:
AEH22123.1
Pilin; KEGG: aae:aq_1434 pilin.
       0.618
AEH22124.1
Pilin; KEGG: hya:HY04AAS1_0157 pilin.
       0.618
AEH22125.1
KEGG: hya:HY04AAS1_0156 hypothetical protein.
       0.617
AEH22126.1
KEGG: hya:HY04AAS1_0155 hypothetical protein.
  
    0.614
AEH22121.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: sfu:Sfum_0050 lytic transglycosylase catalytic subunit.
       0.545
AEH23164.1
KEGG: tvo:TVN0065 MarC family integral membrane protein; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related.
  
    0.536
AEH22355.1
PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: tye:THEYE_A1050 sodium/hydrogen exchanger family/TrkA domain protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
  
  
 0.507
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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