STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22168.1KEGG: pcu:pc0861 hypothetical protein; PFAM: ATPase associated with various cellular activities, AAA-5; SMART: ATPase, AAA+ type, core. (295 aa)    
Predicted Functional Partners:
AEH22169.1
KEGG: pcu:pc0862 hypothetical protein.
 
     0.955
AEH22170.1
KEGG: sfu:Sfum_3765 two component sigma54 specific fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
       0.615
AEH22171.1
KEGG: dma:DMR_31680 hypothetical protein.
       0.561
AEH22172.1
KEGG: cni:Calni_1809 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core.
       0.550
AEH22173.1
Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
       0.526
AEH22174.1
KEGG: dak:DaAHT2_1190 flagellar basal-body rod protein FlgC; TIGRFAM: Flagellar basal-body rod protein FlgC; PFAM: Protein of unknown function DUF1078, C-terminal.
       0.526
AEH22181.1
PFAM: Magnesium transporter, MgtE intracellular region; KEGG: das:Daes_3004 MgtE intracellular region.
 
     0.517
fliE
TIGRFAM: Flagellar hook-basal body complex protein FliE; HAMAP: Flagellar hook-basal body complex protein FliE; KEGG: dte:Dester_1231 flagellar hook-basal body complex protein FliE; PFAM: Flagellar hook-basal body complex protein FliE.
       0.500
AEH22176.1
Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
       0.440
AEH22177.1
KEGG: dak:DaAHT2_1187 flagellar motor switch protein FliG; TIGRFAM: Flagellar motor switch protein FliG; PFAM: Flagellar motor switch protein FliG.
       0.440
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.