AEH22198.1 protein (Thermodesulfobacterium geofontis)

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Score

AEH22198.1

PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein. (177 aa)

Predicted Functional Partners:

rpmF

0.978

rpsF

0.896

rpsP

0.880

rplK

0.879

rplM

0.870

trmD

0.867

rplU

0.864

rpsB

0.862

infC

0.860

rplD

0.859

Your Current Organism:

Thermodesulfobacterium geofontis

NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AEH22198.1	infC	TOPB45_0082	TOPB45_0689	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	0.860
AEH22198.1	rplD	TOPB45_0082	TOPB45_0754	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.859
AEH22198.1	rplK	TOPB45_0082	TOPB45_0168	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.879
AEH22198.1	rplM	TOPB45_0082	TOPB45_0715	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.870
AEH22198.1	rplU	TOPB45_0082	TOPB45_1358	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.864
AEH22198.1	rpmF	TOPB45_0082	TOPB45_0083	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: geo:Geob_2610 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.978
AEH22198.1	rpsB	TOPB45_0082	TOPB45_1015	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	Ribosomal protein S2; KEGG: glo:Glov_2708 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.862
AEH22198.1	rpsF	TOPB45_0082	TOPB45_0190	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.896
AEH22198.1	rpsP	TOPB45_0082	TOPB45_0706	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: cth:Cthe_0769 30S ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.880
AEH22198.1	trmD	TOPB45_0082	TOPB45_0709	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.867
infC	AEH22198.1	TOPB45_0689	TOPB45_0082	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	PFAM: Protein of unknown function DUF177; KEGG: tye:THEYE_A1480 hypothetical protein.	0.860
infC	rplD	TOPB45_0689	TOPB45_0754	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L4/L1e; Forms part of the polypeptide exit tunnel.	0.902
infC	rplK	TOPB45_0689	TOPB45_0168	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.929
infC	rplM	TOPB45_0689	TOPB45_0715	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.954
infC	rplU	TOPB45_0689	TOPB45_1358	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.913
infC	rpmF	TOPB45_0689	TOPB45_0083	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	TIGRFAM: Ribosomal protein L32p; HAMAP: Ribosomal protein L32p; KEGG: geo:Geob_2610 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; Belongs to the bacterial ribosomal protein bL32 family.	0.874
infC	rpsB	TOPB45_0689	TOPB45_1015	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	Ribosomal protein S2; KEGG: glo:Glov_2708 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.985
infC	rpsF	TOPB45_0689	TOPB45_0190	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA.	0.981
infC	rpsP	TOPB45_0689	TOPB45_0706	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	TIGRFAM: Ribosomal protein S16; HAMAP: Ribosomal protein S16; KEGG: cth:Cthe_0769 30S ribosomal protein S16; PFAM: Ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.935
infC	trmD	TOPB45_0689	TOPB45_0709	Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.	tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.	0.426