Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AEH22308.1NLP/P60 protein; KEGG: tye:THEYE_A1300 probable endopeptidase LytE; PFAM: NLP/P60; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup. (402 aa)    
Predicted Functional Partners:
AEH23098.1
PFAM: Lytic transglycosylase-like, catalytic; KEGG: dpr:Despr_0882 lytic transglycosylase catalytic.
 
    
 0.858
AEH23108.1
TIGRFAM: Peptidase S41A, C-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: sfu:Sfum_3063 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF; Belongs to the peptidase S41A family.
  
 
 0.767
AEH23359.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: afl:Aflv_2559 cell division ATPase; SMART: ATPase, AAA+ type, core.
  
 
 0.726
pal
PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: tye:THEYE_A2098 peptidoglycan-associated lipoprotein; Belongs to the Pal lipoprotein family.
  
 
 0.687
AEH22276.1
PFAM: Peptidase M23; KEGG: hth:HTH_0200 putative lipoprotein.
 
  
 0.636
AEH22306.1
PFAM: NUDIX hydrolase domain; KEGG: dvl:Dvul_0325 NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
  
 0.635
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
 
  
 0.611
AEH22307.1
KEGG: tam:Theam_1017 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Fumarate lyase; Adenylosuccinate lyase, C-terminal.
       0.610
AEH22532.1
KEGG: din:Selin_2214 cell wall hydrolase/autolysin; PFAM: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding lysin domain; SMART: Cell wall hydrolase/autolysin, catalytic; Peptidoglycan-binding Lysin subgroup.
  
  
 0.567
AEH22353.1
KEGG: dak:DaAHT2_0246 penicillin-binding protein, 1A family; TIGRFAM: Penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase.
 
  
 0.566
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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