STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AEH22350.1Cysteine desulfurase; KEGG: dth:DICTH_0557 aminotransferase, class V superfamily; PFAM: Aminotransferase, class V/Cysteine desulfurase. (373 aa)    
Predicted Functional Partners:
AEH23322.1
PFAM: SirA-like; KEGG: tye:THEYE_A1506 hypothetical protein; Belongs to the sulfur carrier protein TusA family.
   
 0.977
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
    
 0.890
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 
 
 0.852
AEH22349.1
Beta-N-acetylhexosaminidase; KEGG: ctc:CTC02158 putative anhydromuramoyl-peptide exo-beta-N-acetylglucosaminidase; PFAM: Glycoside hydrolase, family 3, N-terminal.
       0.799
AEH23094.1
Selenium metabolism protein YedF; KEGG: tye:THEYE_A0996 hypothetical protein; TIGRFAM: SirA-related, selenium metabolism; PFAM: SirA-like; Belongs to the sulfur carrier protein TusA family.
   
 
 0.780
AEH22348.1
TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; KEGG: dte:Dester_0737 hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region.
       0.773
AEH22154.1
PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: gme:Gmet_3080 nitrogen-fixing NifU-like.
  
 
 0.763
AEH22347.1
KEGG: dak:DaAHT2_2214 hypothetical protein.
       0.757
AEH22825.1
TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; KEGG: sfu:Sfum_2174 putative alpha-isopropylmalate/homocitrate synthase family transferase; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
 
    0.738
AEH23507.1
KEGG: tye:THEYE_A1309 Rrf2 family protein; TIGRFAM: Transcriptional regulator, Rrf2; PFAM: Transcriptional regulator, Rrf2.
  
  
 0.717
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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