Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AEH22402.1Drug resistance transporter, EmrB/QacA subfamily; KEGG: ddf:DEFDS_0617 multidrug-efflux transporter MFS family; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1. (537 aa)    
Predicted Functional Partners:
AEH22403.1
PFAM: Secretion protein HlyD; KEGG: hth:HTH_0028 multidrug resistance efflux pump.
 
   0.940
AEH22404.1
KEGG: deg:DehalGT_0699 thymidylate synthase, putative.
       0.490
AEH23134.1
TIGRFAM: putative regulatory domain-containing; KEGG: saf:SULAZ_0617 hypothetical protein.
  
     0.454
AEH23135.1
Putative circadian clock protein, KaiC; KEGG: saf:SULAZ_0618 ATPase, RecA-superfamily; TIGRFAM: KaiC domain protein, AF_0795 family; PFAM: Circadian clock protein KaiC, central region.
  
     0.404
Your Current Organism:
Thermodesulfobacterium geofontis
NCBI taxonomy Id: 795359
Other names: T. geofontis OPF15, Thermodesulfobacterium geofontis OPF15, Thermodesulfobacterium sp. OPF15
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